Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei
Accession NumberQRZL00000000.1
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 2 protein | DWW04_07945 | Not Available | + | 1894203 - 1896680 | 93146.2 |
| rhamnogalacturonan acetylesterase | DWW04_07950 | Not Available | + | 1896689 - 1897936 | 47956.2 |
| glycoside hydrolase | DWW04_07955 | Not Available | + | 1898039 - 1900255 | 84177.7 |
| alpha-galactosidase | DWW04_07960 | Not Available | + | 1900277 - 1901899 | 61041.4 |
| alpha-l-rhamnosidase | DWW04_07965 | Not Available | + | 1901909 - 1903684 | 66210.6 |
| helix-turn-helix domain-containing protein | DWW04_07970 | Not Available | + | 1903816 - 1906602 | 106027.0 |
| glucuronyl hydrolase | DWW04_07980 | Not Available | + | 1909757 - 1910947 | 45461.8 |
| duf2264 domain-containing protein | DWW04_07985 | Not Available | + | 1910937 - 1912166 | 46401.1 |
| glycoside hydrolase family 2 | DWW04_07990 | Not Available | + | 1912461 - 1915328 | 108216.0 |
| tonb-dependent receptor | DWW04_07995 | Not Available | + | 1915523 - 1918552 | 111875.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
