Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei
Accession NumberQRZL00000000.1
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | DWW04_07890 | Not Available | - | 1876598 - 1878223 | 61259.6 |
| susc/raga family tonb-linked outer membrane protein | DWW04_07895 | Not Available | - | 1878236 - 1881601 | 124197.0 |
| duf4974 domain-containing protein | DWW04_07900 | Not Available | - | 1881855 - 1882868 | 38741.3 |
| rna polymerase sigma-70 factor | DWW04_07905 | Not Available | + | 1883013 - 1883579 | 22146.8 |
| dna-binding protein | DWW04_07910 | Not Available | - | 1883751 - 1884392 | 24579.6 |
| helicase | DWW04_07915 | Not Available | + | 1884721 - 1886082 | 52178.2 |
| rna polymerase sigma-70 factor | DWW04_07925 | Not Available | + | 1886571 - 1887158 | 22834.5 |
| duf4974 domain-containing protein | DWW04_07930 | Not Available | + | 1887277 - 1888221 | 35972.2 |
| susc/raga family tonb-linked outer membrane protein | DWW04_07935 | Not Available | + | 1888376 - 1891924 | 130798.0 |
| ragb/susd family nutrient uptake outer membrane protein | DWW04_07940 | Not Available | + | 1891938 - 1893989 | 77960.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
