Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei
Accession NumberQRZL00000000.1
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nadh-quinone oxidoreductase subunit a | DWW04_07790 | Not Available | - | 1844875 - 1845225 | 13099.5 |
| hypothetical protein | DWW04_07795 | Not Available | - | 1845329 - 1845706 | 14727.8 |
| trkh family potassium uptake protein | DWW04_07800 | Not Available | - | 1845810 - 1847264 | 53574.4 |
| trk system potassium transporter trka | DWW04_07805 | Not Available | - | 1847264 - 1848604 | 49250.4 |
| 1-deoxy-d-xylulose-5-phosphate synthase | DWW04_07810 | Not Available | - | 1848617 - 1850515 | 70239.0 |
| gscfa domain protein | DWW04_07815 | Not Available | + | 1850608 - 1851594 | 38511.4 |
| bifunctional udp-n-acetylmuramoyl-tripeptide:d-alanyl-d-alanine ligase/alanine racemase | DWW04_07820 | Not Available | + | 1851570 - 1854035 | 92734.8 |
| duf4858 domain-containing protein | DWW04_07825 | Not Available | + | 1854125 - 1854688 | 21513.1 |
| exopolygalacturonase | DWW04_07830 | Not Available | - | 1854840 - 1856144 | 49169.9 |
| beta-galactosidase | DWW04_07835 | Not Available | - | 1856179 - 1859091 | 110007.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
