Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei
Accession NumberQRZL00000000.1
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | DWW04_07390 | Not Available | + | 1746222 - 1747694 | 54813.8 |
| alpha-l-rhamnosidase | DWW04_07395 | Not Available | + | 1747821 - 1751339 | 132137.0 |
| glycoside hydrolase | DWW04_07400 | Not Available | + | 1751593 - 1753536 | 73310.7 |
| alpha-l-arabinofuranosidase | DWW04_07405 | Not Available | + | 1753564 - 1756062 | 92445.5 |
| beta-galactosidase | DWW04_07410 | Not Available | + | 1756079 - 1758427 | 88354.7 |
| helix-turn-helix domain-containing protein | DWW04_07415 | Not Available | + | 1758581 - 1761421 | 107963.0 |
| tonb-dependent receptor | DWW04_07420 | Not Available | + | 1761633 - 1764581 | 108893.0 |
| ragb/susd family nutrient uptake outer membrane protein | DWW04_07425 | Not Available | + | 1764603 - 1766237 | 62501.4 |
| glycosyl hydrolase | DWW04_07430 | Not Available | + | 1766410 - 1768761 | 88877.1 |
| nuclease | DWW04_07435 | Not Available | + | 1768791 - 1768952 | 6200.32 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
