Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei
Accession NumberQRZL00000000.1
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | DWW04_07340 | Not Available | + | 1726174 - 1727865 | 62940.1 |
| beta-xylosidase | DWW04_07345 | Not Available | + | 1728145 - 1730601 | 94019.7 |
| beta-glucanase | DWW04_07350 | Not Available | + | 1730627 - 1731769 | 42595.3 |
| glycoside hydrolase | DWW04_07355 | Not Available | + | 1732095 - 1733096 | 37760.4 |
| ragb/susd family nutrient uptake outer membrane protein | DWW04_07360 | Not Available | - | 1733216 - 1734769 | 58320.5 |
| tonb-dependent receptor | DWW04_07365 | Not Available | - | 1734782 - 1737853 | 113265.0 |
| helicase | DWW04_07370 | Not Available | - | 1738368 - 1740881 | 97182.2 |
| rna polymerase sigma-70 factor | DWW04_07375 | Not Available | + | 1741085 - 1741645 | 22126.4 |
| duf4974 domain-containing protein | DWW04_07380 | Not Available | + | 1741719 - 1742663 | 36164.8 |
| susc/raga family tonb-linked outer membrane protein | DWW04_07385 | Not Available | + | 1742814 - 1746200 | 124041.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
