Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei
Accession NumberQRZL00000000.1
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tigr00159 family protein | DWW04_07290 | Not Available | - | 1704382 - 1705146 | 28478.5 |
| dihydropteroate synthase | DWW04_07295 | Not Available | - | 1705178 - 1706035 | 31983.9 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | DWW04_07300 | Not Available | + | 1706154 - 1707452 | 48282.1 |
| neuraminidase | DWW04_07305 | Not Available | + | 1707875 - 1709149 | 49208.0 |
| duf2264 domain-containing protein | DWW04_07310 | Not Available | + | 1709241 - 1711556 | 88937.2 |
| duf3810 domain-containing protein | DWW04_07315 | Not Available | + | 1711698 - 1712738 | 41001.0 |
| hybrid sensor histidine kinase/response regulator | DWW04_07320 | Not Available | - | 1712956 - 1716990 | 153273.0 |
| tonb-dependent receptor | DWW04_07325 | Not Available | + | 1717309 - 1720617 | 123759.0 |
| ragb/susd family nutrient uptake outer membrane protein | DWW04_07330 | Not Available | + | 1720633 - 1722657 | 76829.5 |
| tonb-dependent receptor | DWW04_07335 | Not Available | + | 1723059 - 1726160 | 114602.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
