Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei
Accession NumberQRZL00000000.1
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| susd/ragb family nutrient-binding outer membrane lipoprotein | DWW04_07010 | Not Available | + | 1631563 - 1633503 | 72026.3 |
| hypothetical protein | DWW04_07015 | Not Available | + | 1633770 - 1634270 | 19223.5 |
| alpha-l-fucosidase | DWW04_07020 | Not Available | + | 1634484 - 1635875 | 53594.9 |
| beta-glucosidase | DWW04_07025 | Not Available | + | 1635929 - 1638238 | 83744.1 |
| glycoside hydrolase family 92 protein | DWW04_07030 | Not Available | - | 1638361 - 1640553 | 82062.1 |
| cof-type had-iib family hydrolase | DWW04_07035 | Not Available | - | 1640757 - 1641539 | 28795.5 |
| glutamate 5-kinase | DWW04_07040 | Not Available | + | 1641698 - 1642780 | 39536.0 |
| gamma-glutamyl-phosphate reductase | DWW04_07045 | Not Available | + | 1642818 - 1644071 | 45494.7 |
| acetylornithine carbamoyltransferase | DWW04_07050 | Not Available | + | 1644091 - 1645056 | 36461.8 |
| rhodanese-like domain-containing protein | DWW04_07055 | Not Available | - | 1645467 - 1645865 | 15066.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
