Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei
Accession NumberQRZL00000000.1
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | DWW04_06960 | Not Available | - | 1612953 - 1616363 | 124912.0 |
| aaa family atpase | DWW04_06965 | Not Available | - | 1616556 - 1617749 | 45837.4 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DWW04_06970 | Not Available | - | 1617976 - 1619889 | 73231.5 |
| susc/raga family tonb-linked outer membrane protein | DWW04_06975 | Not Available | - | 1619911 - 1623312 | 124099.0 |
| virulence-associated protein e | DWW04_06980 | Not Available | - | 1623649 - 1624800 | 45288.6 |
| hypothetical protein | DWW04_06985 | Not Available | - | 1624906 - 1625112 | 7958.76 |
| dna-binding protein | DWW04_06990 | Not Available | + | 1625114 - 1625752 | 24117.6 |
| glpgli family protein | DWW04_06995 | Not Available | + | 1625831 - 1627537 | 63526.1 |
| hypothetical protein | DWW04_07000 | Not Available | + | 1627549 - 1627971 | 16472.0 |
| susc/raga family tonb-linked outer membrane protein | DWW04_07005 | Not Available | + | 1628188 - 1631541 | 122687.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
