Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei
Accession NumberQRZL00000000.1
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | DWW04_06760 | Not Available | - | 1551852 - 1554419 | 97396.0 |
| duf4981 domain-containing protein | DWW04_06765 | Not Available | - | 1554815 - 1557910 | 117529.0 |
| ion transporter | DWW04_06770 | Not Available | + | 1558026 - 1558883 | 32709.8 |
| lytic transglycosylase domain-containing protein | DWW04_06775 | Not Available | - | 1558909 - 1559907 | 37405.8 |
| arac family transcriptional regulator | DWW04_06780 | Not Available | - | 1559915 - 1560835 | 35143.8 |
| hybrid sensor histidine kinase/response regulator | DWW04_06785 | Not Available | + | 1560984 - 1565144 | 157872.0 |
| tonb-dependent receptor | DWW04_06790 | Not Available | + | 1565285 - 1568356 | 114433.0 |
| ragb/susd family nutrient uptake outer membrane protein | DWW04_06795 | Not Available | + | 1568368 - 1569987 | 59890.2 |
| right-handed parallel beta-helix repeat-containing protein | DWW04_06800 | Not Available | + | 1570156 - 1571670 | 55948.2 |
| duf4251 domain-containing protein | DWW04_06805 | Not Available | - | 1571777 - 1572274 | 18510.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
