Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei
Accession NumberQRZL00000000.1
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| susd/ragb family nutrient-binding outer membrane lipoprotein | DWW04_06710 | Not Available | + | 1538970 - 1540511 | 57036.3 |
| endoglycosidase | DWW04_06715 | Not Available | + | 1540543 - 1541601 | 39770.5 |
| duf1735 domain-containing protein | DWW04_06720 | Not Available | + | 1541619 - 1542740 | 41486.2 |
| duf1735 domain-containing protein | DWW04_06725 | Not Available | + | 1542759 - 1543754 | 37248.6 |
| duf4838 domain-containing protein | DWW04_06730 | Not Available | + | 1543828 - 1546059 | 84816.5 |
| mfs transporter | DWW04_06735 | Not Available | + | 1546107 - 1547405 | 47979.9 |
| glycosidase | DWW04_06740 | Not Available | + | 1547438 - 1548439 | 37626.8 |
| glycosyl hydrolase family 109 protein 2 | DWW04_06745 | Not Available | + | 1548898 - 1550139 | 47371.7 |
| fecr family protein | DWW04_06750 | Not Available | - | 1550263 - 1551273 | 38705.1 |
| rna polymerase sigma-70 factor | DWW04_06755 | Not Available | - | 1551270 - 1551797 | 20776.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
