Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei
Accession NumberQRZL00000000.1
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sigma-70 family rna polymerase sigma factor | DWW04_05945 | Not Available | + | 1368533 - 1369117 | 23261.7 |
| duf4974 domain-containing protein | DWW04_05950 | Not Available | + | 1369184 - 1370344 | 43986.5 |
| susc/raga family tonb-linked outer membrane protein | DWW04_05955 | Not Available | + | 1370400 - 1373717 | 122463.0 |
| ragb/susd family nutrient uptake outer membrane protein | DWW04_05960 | Not Available | + | 1373738 - 1375228 | 55729.7 |
| duf255 domain-containing protein | DWW04_05965 | Not Available | + | 1375247 - 1376413 | 44544.2 |
| tlpa family protein disulfide reductase | DWW04_05970 | Not Available | + | 1376415 - 1377764 | 50458.3 |
| sodium ion-translocating decarboxylase subunit beta | DWW04_05975 | Not Available | - | 1377962 - 1379197 | 44269.9 |
| oxaloacetate decarboxylase | DWW04_05980 | Not Available | - | 1379197 - 1381059 | 68972.7 |
| oxaloacetate decarboxylase | DWW04_05985 | Not Available | - | 1381090 - 1381341 | 8695.18 |
| nitroreductase | DWW04_05990 | Not Available | - | 1381610 - 1382110 | 18979.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
