Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei
Accession NumberQRZL00000000.1
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tigr01212 family radical sam protein | DWW04_05895 | Not Available | - | 1355582 - 1356508 | 35431.8 |
| s9 family peptidase | DWW04_05900 | Not Available | + | 1356595 - 1358796 | 83411.0 |
| lipoyl synthase | DWW04_05905 | Not Available | + | 1358894 - 1359748 | 31741.2 |
| hypothetical protein | DWW04_05910 | Not Available | + | 1359806 - 1360795 | 37679.9 |
| sam-dependent methyltransferase | DWW04_05915 | Not Available | - | 1360811 - 1361515 | 26041.0 |
| gliding motility lipoprotein gldb | DWW04_05920 | Not Available | - | 1361539 - 1362540 | 38857.2 |
| enoyl-acp reductase | DWW04_05925 | Not Available | - | 1362548 - 1363405 | 31326.5 |
| glycoside hydrolase family 28 protein | DWW04_05930 | Not Available | + | 1363782 - 1365401 | 59172.8 |
| duf4861 domain-containing protein | DWW04_05935 | Not Available | + | 1365540 - 1366754 | 45631.0 |
| glycoside hydrolase | DWW04_05940 | Not Available | + | 1366768 - 1368432 | 61579.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
