Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei
Accession NumberQRZL00000000.1
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gdp-mannose 4,6-dehydratase | DWW04_05370 | Not Available | - | 1238908 - 1239987 | 40921.0 |
| carboxypeptidase regulatory-like domain-containing protein | DWW04_05375 | Not Available | - | 1240014 - 1241240 | 43573.5 |
| hypothetical protein | DWW04_05380 | Not Available | - | 1241268 - 1242485 | 46020.1 |
| hypothetical protein | DWW04_05385 | Not Available | - | 1242490 - 1243218 | 27188.0 |
| glycosyltransferase | DWW04_05390 | Not Available | - | 1243215 - 1244033 | 30941.9 |
| glycosyltransferase family 2 protein | DWW04_05395 | Not Available | - | 1244062 - 1244967 | 35756.9 |
| putative colanic acid biosynthesis acetyltransferase | DWW04_05400 | Not Available | - | 1244960 - 1245511 | 20878.3 |
| glycosyltransferase | DWW04_05405 | Not Available | - | 1245514 - 1246611 | 41865.6 |
| hypothetical protein | DWW04_05410 | Not Available | - | 1246622 - 1247710 | 42488.5 |
| glycosyltransferase | DWW04_05415 | Not Available | - | 1248155 - 1249267 | 43200.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
