Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei
Accession NumberQRZL00000000.1
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna replication and repair protein recf | DWW04_05220 | Not Available | + | 1202881 - 1203996 | 43006.6 |
| duf721 domain-containing protein | DWW04_05225 | Not Available | + | 1203993 - 1204283 | 11249.9 |
| 5-formyltetrahydrofolate cyclo-ligase | DWW04_05230 | Not Available | - | 1204456 - 1204986 | 20393.5 |
| s41 family peptidase | DWW04_05235 | Not Available | - | 1204910 - 1206658 | 64827.6 |
| cmp deaminase | DWW04_05240 | Not Available | - | 1206673 - 1207107 | 16211.4 |
| duf4847 domain-containing protein | DWW04_05245 | Not Available | - | 1207112 - 1207606 | 18504.7 |
| m3 family peptidase | DWW04_05250 | Not Available | - | 1207620 - 1209662 | 77750.2 |
| crp/fnr family transcriptional regulator | DWW04_05255 | Not Available | - | 1209820 - 1210497 | 25891.4 |
| marc family protein | DWW04_05260 | Not Available | + | 1210684 - 1211286 | 22140.0 |
| fad:protein fmn transferase | DWW04_05265 | Not Available | - | 1211445 - 1212461 | 37735.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
