Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei
Accession NumberQRZL00000000.1
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cold shock domain-containing protein | DWW04_05015 | Not Available | - | 1161168 - 1161614 | 17074.5 |
| 30s ribosomal protein s1 | DWW04_05020 | Not Available | - | 1161863 - 1163659 | 67077.1 |
| hypothetical protein | DWW04_05025 | Not Available | + | 1163876 - 1164085 | 8370.21 |
| simpl domain-containing protein | DWW04_05030 | Not Available | - | 1164176 - 1164877 | 26357.7 |
| n-acetylmuramic acid 6-phosphate etherase | DWW04_05035 | Not Available | - | 1164881 - 1165717 | 30366.9 |
| atpase | DWW04_05040 | Not Available | - | 1165714 - 1166553 | 30813.0 |
| dna-binding response regulator | DWW04_05050 | Not Available | - | 1170034 - 1170819 | 30204.5 |
| histidine kinase | DWW04_05055 | Not Available | - | 1170812 - 1171855 | 40414.5 |
| porin family protein | DWW04_05060 | Not Available | - | 1171972 - 1172610 | 24617.4 |
| duf4136 domain-containing protein | DWW04_05065 | Not Available | - | 1172623 - 1173255 | 24220.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
