Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei
Accession NumberQRZL00000000.1
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sigma-70 family rna polymerase sigma factor | DWW04_04965 | Not Available | - | 1148487 - 1149032 | 20982.2 |
| hypothetical protein | DWW04_04970 | Not Available | + | 1149176 - 1149616 | 16110.3 |
| valine--trna ligase | DWW04_04975 | Not Available | - | 1149797 - 1152424 | 99811.7 |
| nucleoside triphosphate pyrophosphohydrolase | DWW04_04980 | Not Available | + | 1152532 - 1153320 | 30711.6 |
| ragb/susd family nutrient uptake outer membrane protein | DWW04_04985 | Not Available | - | 1153515 - 1155245 | 65720.7 |
| tonb-dependent receptor | DWW04_04990 | Not Available | - | 1155269 - 1158430 | 117858.0 |
| hypothetical protein | DWW04_04995 | Not Available | - | 1158703 - 1159149 | 17686.6 |
| hypothetical protein | DWW04_05000 | Not Available | - | 1159161 - 1159538 | 14654.4 |
| rna polymerase sigma factor | DWW04_05005 | Not Available | - | 1159583 - 1160134 | 21676.8 |
| ribonuclease z | DWW04_05010 | Not Available | - | 1160168 - 1161097 | 35262.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
