Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei
Accession NumberQRZL00000000.1
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase ubie | DWW04_04815 | Not Available | - | 1114284 - 1115021 | 27935.9 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | DWW04_04820 | Not Available | - | 1115118 - 1116062 | 35902.1 |
| phoh family protein | DWW04_04825 | Not Available | - | 1116083 - 1117087 | 37741.5 |
| hypothetical protein | DWW04_04830 | Not Available | + | 1117245 - 1117919 | 24792.2 |
| trna pseudouridine(38-40) synthase trua | DWW04_04835 | Not Available | + | 1117924 - 1118727 | 31005.9 |
| dna metabolism protein | DWW04_04840 | Not Available | - | 1118693 - 1119460 | 30575.8 |
| putative dna modification/repair radical sam protein | DWW04_04845 | Not Available | - | 1119457 - 1120725 | 48577.8 |
| peptidylprolyl isomerase | DWW04_04850 | Not Available | - | 1121153 - 1121719 | 20612.2 |
| hypothetical protein | DWW04_04855 | Not Available | + | 1122075 - 1122449 | 14063.1 |
| dihydroxy-acid dehydratase | DWW04_04860 | Not Available | + | 1122860 - 1124662 | 64171.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
