Geotalea uraniireducens Rf4

Gram-negativeRodNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Desulfuromonadia

Order

Geobacterales

Family

Geobacteraceae

Genus

Geotalea

Description

Geotalea uraniireducens Rf4 is a Gram-negative, rod-shaped bacterium that exhibits a microaerophilic lifestyle, thriving in environments with limited oxygen availability. This organism typically exists as single cells rather than in clusters or chains, indicating a solitary growth habit. Geotalea uraniireducens Rf4 is classified as a chemolithotroph, utilizing inorganic compounds as its primary energy source, which allows it to exploit a variety of habitats. The ability of Geotalea uraniireducens Rf4 to oxidize inorganic substrates for energy may contribute to biogeochemical cycling within its environments. Its microaerophilic nature suggests a specialized adaptation to niches where oxygen levels are low but not entirely absent, potentially enabling it to occupy ecological roles in diverse settings, such as sediments or subsurface soils. The unique metabolic capabilities of this bacterium may play a crucial role in the reduction of uranium and other metal ions, which could have implications for bioremediation strategies in contaminated environments. Understanding the physiology and ecological interactions of Geotalea uraniireducens Rf4 may provide insights into the microbial processes that govern nutrient cycling and pollutant degradation in microaerophilic niches.

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassDesulfuromonadia
OrderGeobacterales
FamilyGeobacteraceae
GenusGeotalea
SpeciesGeotalea uraniireducens
StrainRf4

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Geotalea uraniireducens Rf4
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceChemolithotroph
PathogenicityNot Available

Genome Summary

Geotalea uraniireducens Rf4


Gene Summary

Adenine Count

1173278 bp

Thymine Count

1177213 bp

Guanine Count

1385790 bp

Cytosine Count

1400083 bp

Genome Length

5136364 bp

Protein-coding Genes

4540 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
chromosomal replication initiator protein dnaaGURA_RS00005Not Available+46 - 139551364.3
dna polymerase iii subunit betaGURA_RS00010Not Available+1611 - 272942251.2
dna replication/repair protein recfGURA_RS00015Not Available+2810 - 390442261.1
dna topoisomerase (atp-hydrolyzing) subunit bGURA_RS00020Not Available+3913 - 629789337.2
dna gyrase subunit aGURA_RS00025Not Available+6355 - 885393481.9
heat repeat domain-containing proteinGURA_RS00030Not Available+8937 - 1051759740.6
nad(p)h-dependent glycerol-3-phosphate dehydrogenaseGURA_RS00035Not Available+10593 - 1160035949.5
atp-binding proteinGURA_RS00040Not Available+11698 - 1397484173.0
response regulatorGURA_RS00045Not Available+13961 - 1548756033.8
sensor histidine kinaseGURA_RS00050Not Available+15519 - 1733368948.3

Displaying genes 1 – 10 of 4601 in total

Metabolites

1682 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm00005992,5-dihydroxypyridineC5H5NO2Chemical structure of 2,5-dihydroxypyridineNot available
Average111.1Da
Monoisotopic111.0320284Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm00012442-succinylbenzoateC11H8O5Chemical structure of 2-succinylbenzoate27415-09-04
Average220.181Da
Monoisotopic220.038270517Da

Displaying 1–10 of 1682 metabolites