Natronomonas pharaonis DSM 2160

MotileAerobe

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natronomonadaceae

Genus

Natronomonas

Description

Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) is an extremely haloalkaliphilic archaeon which was isolated from salt-saturated lakes of pH 11. It grows optimally at pH 8.5 in 3.5 M NaCL. Its genome consists of a chromosome and two plasmids. Twenty percent of N.pharaonis proteins have no homologs in other species. It possesses the complete set of enzymes for the biosynthesis of amino acids and coenzymes. It is probably not able to use sugar because it lacks key enzymes of glycolytic pathways. It has transporters for diverse nitrogen souces such as ammonium, urea, nitrite/nitrate in order to cope with reduced levels of ammonium ions resulting from extreme pH conditions. The Tat pathway might be extensively used not only for coenzyme-containing redox components such as halocyanins but also for the export of non-redox proteins. Lipoproteins make up one third of the predicted secretome and seem to be translocated via the Tat pathway. It possesses proteins with high N- and C-terminal similarity to halophilic cell surface glycoproteins forming regular S-layer cell envelopes, however, instead of a typical S-layer, it could form a more complex cell envelope with various glycoprotein species. It harbors a single blue-light photoreceptor that is very similar to the blue-light photoreceptor from Halobacterium. (HAMAP: NATPD)

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatronomonadaceae
GenusNatronomonas
SpeciesNatronomonas pharaonis
StrainDSM 2160

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityYes
Flagellar presenceYes
Number of membranes1
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourcePhototroph
PathogenicityNo

Genome Summary

Natronomonas pharaonis DSM 2160

Accession NumberNC_007428.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
sdr family oxidoreductaseNP_RS12850Not Available+2530262 - 253114932243.4
mfs transporterNP_RS12855Not Available+2531198 - 253238840579.2
glycosyl transferase family 2NP_RS12860Not Available+2532475 - 253359640531.3
peptidyl-trna hydrolase pth2NP_RS12865Not Available+2533637 - 253397511935.1
nadh:flavin oxidoreductase/nadh oxidaseNP_RS12870Not Available-2533969 - 253504238732.1
hypothetical proteinNP_RS14825Not Available+2535190 - 25353275067.87
trna pseudouridine(13) synthase trudNP_RS12875Not Available+2535397 - 253670447905.3
duf2103 domain-containing proteinNP_RS12880Not Available+2536844 - 253756626277.7
50s ribosomal protein l37aeNP_RS12885Not Available+2537618 - 25378789179.41
dna-directed rna polymerase subunit pNP_RS12890Not Available+2537885 - 25380195236.3

Displaying genes 2641 – 2650 of 2887 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites