Natronomonas pharaonis DSM 2160

MotileAerobe

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natronomonadaceae

Genus

Natronomonas

Description

Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) is an extremely haloalkaliphilic archaeon which was isolated from salt-saturated lakes of pH 11. It grows optimally at pH 8.5 in 3.5 M NaCL. Its genome consists of a chromosome and two plasmids. Twenty percent of N.pharaonis proteins have no homologs in other species. It possesses the complete set of enzymes for the biosynthesis of amino acids and coenzymes. It is probably not able to use sugar because it lacks key enzymes of glycolytic pathways. It has transporters for diverse nitrogen souces such as ammonium, urea, nitrite/nitrate in order to cope with reduced levels of ammonium ions resulting from extreme pH conditions. The Tat pathway might be extensively used not only for coenzyme-containing redox components such as halocyanins but also for the export of non-redox proteins. Lipoproteins make up one third of the predicted secretome and seem to be translocated via the Tat pathway. It possesses proteins with high N- and C-terminal similarity to halophilic cell surface glycoproteins forming regular S-layer cell envelopes, however, instead of a typical S-layer, it could form a more complex cell envelope with various glycoprotein species. It harbors a single blue-light photoreceptor that is very similar to the blue-light photoreceptor from Halobacterium. (HAMAP: NATPD)

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatronomonadaceae
GenusNatronomonas
SpeciesNatronomonas pharaonis
StrainDSM 2160

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityYes
Flagellar presenceYes
Number of membranes1
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourcePhototroph
PathogenicityNo

Genome Summary

Natronomonas pharaonis DSM 2160

Accession NumberNC_007428.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
hypothetical proteinNP_RS00005Not Available-6 - 110638924.4
Trna-valNot AvailableNot Available+1153 - 1224Not Available
duf192 domain-containing proteinNP_RS00015Not Available+1310 - 186119494.3
abc transporter atp-binding proteinNP_RS00020Not Available+1933 - 385870144.1
atp-grasp domain-containing proteinNP_RS00025Not Available+3961 - 483031738.2
hsp20/alpha crystallin family proteinNP_RS00030Not Available-4864 - 523813728.5
type ii glyceraldehyde-3-phosphate dehydrogenaseNP_RS00035Not Available-5289 - 630536123.9
aminopeptidaseNP_RS00040Not Available+6437 - 741433549.5
hvo_0476 family zinc finger proteinNP_RS00045Not Available+7452 - 810223814.3
protein-l-isoaspartate(d-aspartate) o-methyltransferaseNP_RS00050Not Available+8106 - 874423026.0

Displaying genes 1 – 10 of 2887 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites