Paramagnetospirillum magneticum AMB-1

Gram-negativeSpirillaMotileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodospirillales

Family

Magnetospirillaceae

Genus

Paramagnetospirillum

Description

Paramagnetospirillum magneticum AMB-1 is a Gram-negative, microaerophilic bacterium characterized by its distinctive spirilla shape and heterotrophic mode of energy acquisition. This organism predominantly inhabits aquatic environments, where it plays a role in the microbial community dynamics. As a microaerophile, P. magneticum AMB-1 requires reduced oxygen levels for optimal growth, which is typical for certain bacteria that thrive in specific niches within water bodies, such as sediments or stratified waters. The unique morphology of P. magneticum AMB-1, coupled with its ability to utilize organic compounds as an energy source, positions it as a significant player in biogeochemical cycles, particularly in the breakdown of organic matter in aquatic ecosystems. Additionally, its adaptation to microaerophilic conditions suggests a specialized ecological role in environments where oxygen concentrations fluctuate, allowing it to compete effectively with other microbial populations. This bacterium is noteworthy for its potential applications in biotechnology and environmental microbiology, as its metabolic capabilities may be leveraged for bioremediation or bioenergy production. Understanding the ecological functions of P. magneticum AMB-1 can provide insights into microbial interactions and the overall health of aquatic ecosystems, highlighting the importance of such microorganisms in maintaining ecological balance and nutrient cycling.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodospirillales
FamilyMagnetospirillaceae
GenusParamagnetospirillum
SpeciesParamagnetospirillum magneticum
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityYes
Flagellar presenceYes
Number of membranes2
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Paramagnetospirillum magneticum AMB-1

Accession NumberNC_007626.1

Gene Summary

Adenine Count

869848 bp

Thymine Count

863976 bp

Guanine Count

1611991 bp

Cytosine Count

1621300 bp

Genome Length

4967148 bp

Protein-coding Genes

4635 genes

Non-Coding Genes

132 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
hypothetical proteinAMB_RS25530Not Available+493972 - 49431311604.0
helix-turn-helix domain-containing proteinAMB_RS25535Q5FUU1+494310 - 49480717814.8
hypothetical proteinAMB_RS26705Not Available+494798 - 4949234707.0
Host-nuclease inhibitor gamAMB_RS02340P06023+494938 - 49547419445.3
Host nuclease inhibitor proteinAMB_RS02345Not Available+495471 - 49581812204.6
hypothetical proteinAMB_RS02350Not Available+495823 - 4961049827.8
Hypothetical proteinAMB_RS02355Not Available+496106 - 49663919185.3
duf1566 domain-containing proteinAMB_RS02360Not Available+496705 - 49724719407.4
four helix bundle proteinAMB_RS02365Not Available+497312 - 49766813202.9
hypothetical proteinAMB_RS26245Not Available+497774 - 4979476405.4

Displaying genes 21 – 30 of 4767 in total

Pathways

23 pathways

Metabolites

343 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000491D-erythruloseC4H8O4Chemical structure of D-erythruloseNot available
Average120.104Da
Monoisotopic120.0422587Da

Displaying 1–10 of 343 metabolites