Rhodoferax ferrireducens T118

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Rhodoferax

Description

Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) is a Gram-negative, motile, short rod with a single polar flagellum. It grows between pH 6.7 and 7.1, with a temperature range of 4-30 degrees C. The optimal growth temperature is 25 degrees Celsius. Electron donors utilized with Fe(III) as the sole electron acceptor included acetate, lactate, malate, propionate, pyruvate, succinate and benzoate. None of the compounds tested was fermented. Unlike other species in this genus, Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) seems not to be a phototroph and not to ferment fructose. (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusRhodoferax
SpeciesRhodoferax ferrireducens
StrainT118

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Rhodoferax ferrireducens T118
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNo

Genome Summary

Rhodoferax ferrireducens T118

Accession NumberNC_007901.1

Gene Summary

Adenine Count

56509 bp

Thymine Count

60860 bp

Guanine Count

69219 bp

Cytosine Count

70859 bp

Genome Length

257447 bp

Protein-coding Genes

261 genes

Non-Coding Genes

8 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
ni/fe-hydrogenase cytochrome b subunitRFER_RS20725Not Available+4564770 - 456593642587.4
nickel-dependent hydrogenase large subunitRFER_RS20730Not Available+4565960 - 456766662236.6
hyad/hybd family hydrogenase maturation endopeptidaseRFER_RS20735Not Available+4567728 - 456821917247.3
hypc/hybg/hupf family hydrogenase formation chaperoneRFER_RS20740Not Available+4568221 - 45684759241.06
[nife]-hydrogenase assembly chaperone hybeRFER_RS20745Not Available+4568472 - 456896918257.9
hydrogenase maturation nickel metallochaperone hypaRFER_RS20750Not Available+4568980 - 456932112325.9
hydrogenase nickel incorporation protein hypbRFER_RS20755Not Available+4569342 - 457028033656.8
carbamoyltransferase hypfRFER_RS20760Not Available+4570277 - 457264684486.4
hypc/hybg/hupf family hydrogenase formation chaperoneRFER_RS20765Not Available+4572615 - 45728578372.19
hydrogenase formation protein hypdRFER_RS20770Not Available+4572854 - 457398441702.4

Displaying genes 4221 – 4230 of 4650 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites