Clostridium drakei str. SL1

rodanaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Clostridium

Description

Clostridium drakei str. SL1 is a Gram-negative, rod-shaped bacterium that exhibits spore-forming capabilities and thrives in anaerobic environments, with an optimal growth temperature of 32.0°C. This microorganism belongs to the genus Clostridium, which is well-known for its anaerobic metabolism and ability to produce endospores, allowing it to survive in harsh conditions. The Gram-negative classification of C. drakei str. SL1 indicates a distinctive cell wall structure characterized by a thin peptidoglycan layer and an outer membrane containing lipopolysaccharides. This structural feature may influence its interactions with the environment and other microorganisms. The rod shape of the bacterium suggests a potential for motility and adaptability within its ecological niche, although specific motility traits are not detailed. As a spore-forming organism, C. drakei str. SL1 can endure unfavorable conditions, entering a dormant state until environmental factors become favorable for growth and reproduction. This sporulation ability is particularly advantageous in anaerobic habitats, where competition for resources and fluctuating conditions can be prevalent. The optimal growth temperature of 32.0°C positions C. drakei str. SL1 within a range that may be typical for many soil and gut-associated microorganisms, suggesting it could play a role in nutrient cycling or contribute to the microbial diversity in anaerobic ecosystems. This adaptability to specific thermal and anaerobic conditions underscores its potential significance in ecological and biological contexts, particularly in environments where oxygen is limited.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium drakei
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperature32
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationspore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridium drakei str. SL1

Accession NumberNZ_CP020953.1

Gene Summary

Adenine Count

2009288 bp

Thymine Count

1996041 bp

Guanine Count

846621 bp

Cytosine Count

843291 bp

Genome Length

5695241 bp

Protein-coding Genes

4995 genes

Non-Coding Genes

174 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
nucleoside kinaseB9W14_RS00190Not Available+35227 - 3688263717.0
l-serine ammonia-lyase, iron-sulfur-dependent subunit betaB9W14_RS00195Not Available+37323 - 3800324591.9
l-serine ammonia-lyase, iron-sulfur-dependent, subunit alphaB9W14_RS00200Not Available+38008 - 3888030256.2
hypothetical proteinB9W14_RS00205Not Available+39290 - 3983220197.1
cdp-diacylglycerol--serine o-phosphatidyltransferaseB9W14_RS00210Not Available-39845 - 4036619119.0
tvp38/tmem64 family proteinB9W14_RS00215Not Available+40552 - 4121724963.0
cbs domain-containing proteinB9W14_RS00220Not Available+41309 - 4173715455.5
yegs/rv2252/bmru family lipid kinaseB9W14_RS00225Not Available+41918 - 4282333951.2
hypothetical proteinB9W14_RS00230Not Available+42923 - 4357325018.6
ygiq family radical sam proteinB9W14_RS00235Not Available-43710 - 4564473771.6

Displaying genes 91 – 100 of 5169 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites