Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli O139:H28 str. E24377A
Accession NumberNC_009801.1
Gene Summary
Adenine Count
1231957 bp
Thymine Count
1226898 bp
Guanine Count
1257721 bp
Cytosine Count
1263043 bp
Genome Length
4979619 bp
Protein-coding Genes
4497 genes
Non-Coding Genes
377 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | ECE24377A_RS00235 | Not Available | + | 33007 - 33294 | 10505.9 |
| peptide deformylase | ECE24377A_RS00245 | Not Available | + | 33671 - 34180 | 19356.7 |
| dde-type integrase/transposase/recombinase | ECE24377A_RS26810 | Not Available | + | 34195 - 34296 | 3597.29 |
| dde-type integrase/transposase/recombinase | ECE24377A_RS28980 | Not Available | - | 34485 - 34703 | 8497.8 |
| dde-type integrase/transposase/recombinase | ECE24377A_RS00255 | Not Available | + | 34790 - 35035 | 9963.34 |
| dde-type integrase/transposase/recombinase | ECE24377A_RS00260 | Not Available | - | 35097 - 36042 | 35203.4 |
| virulence factor virk | ECE24377A_RS00265 | Not Available | - | 36107 - 37057 | 36943.8 |
| putative hexosyltransferase capu | ECE24377A_RS26820 | Not Available | - | 37062 - 38150 | 40807.8 |
| polysaccharide deacetylase family protein | ECE24377A_RS00275 | Not Available | - | 38153 - 38995 | 32951.5 |
| hypothetical protein | ECE24377A_RS00280 | Not Available | - | 39239 - 39781 | 19743.9 |
Pathways
12507 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism