Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli O139:H28 str. E24377A
Accession NumberNC_009801.1
Gene Summary
Adenine Count
1231957 bp
Thymine Count
1226898 bp
Guanine Count
1257721 bp
Cytosine Count
1263043 bp
Genome Length
4979619 bp
Protein-coding Genes
4497 genes
Non-Coding Genes
377 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dde-type integrase/transposase/recombinase | ECE24377A_RS30915 | Not Available | - | 20168 - 20248 | 3273.85 |
| dde-type integrase/transposase/recombinase | ECE24377A_RS26615 | Not Available | + | 20236 - 20592 | 13575.6 |
| parb/repb/spo0j family partition protein | ECE24377A_RS00145 | Not Available | + | 20662 - 22626 | 71617.1 |
| conjugation system sos inhibitor psib | ECE24377A_RS00150 | Not Available | + | 22681 - 23058 | 13833.3 |
| plasmid sos inhibition protein a | ECE24377A_RS00155 | Not Available | + | 23112 - 23873 | 29327.8 |
| hypothetical protein | ECE24377A_RS00160 | Not Available | + | 23815 - 24129 | 12139.6 |
| dde-type integrase/transposase/recombinase | ECE24377A_RS30920 | Not Available | + | 24279 - 24431 | 5752.97 |
| hok/gef family protein | ECE24377A_RS00170 | Not Available | + | 24376 - 24498 | 4556.69 |
| dde-type integrase/transposase/recombinase | ECE24377A_RS30665 | Not Available | - | 24736 - 25081 | 12655.6 |
| hypothetical protein | ECE24377A_RS30325 | Not Available | + | 25398 - 25568 | 5638.46 |
Pathways
12507 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism