Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli O139:H28 str. E24377A
Accession NumberNC_009801.1
Gene Summary
Adenine Count
1231957 bp
Thymine Count
1226898 bp
Guanine Count
1257721 bp
Cytosine Count
1263043 bp
Genome Length
4979619 bp
Protein-coding Genes
4497 genes
Non-Coding Genes
377 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dde-type integrase/transposase/recombinase | ECE24377A_RS00080 | Not Available | + | 11677 - 11927 | 8646.33 |
| dde-type integrase/transposase/recombinase | ECE24377A_RS00085 | Not Available | - | 12193 - 12387 | 7127.51 |
| dde-type integrase/transposase/recombinase | ECE24377A_RS26770 | Not Available | + | 12448 - 13314 | 30138.4 |
| dde-type integrase/transposase/recombinase | ECE24377A_RS00100 | Not Available | - | 13358 - 13831 | 17582.6 |
| group ii intron reverse transcriptase/maturase | ECE24377A_RS00105 | Not Available | - | 13921 - 15429 | 58089.8 |
| dde-type integrase/transposase/recombinase | ECE24377A_RS00115 | Not Available | - | 16181 - 16333 | 5883.01 |
| heat-labile enterotoxin lt subunit a | ECE24377A_RS26785 | Not Available | + | 16649 - 17425 | 29874.9 |
| heat-labile enterotoxin lt subunit b | ECE24377A_RS00120 | Not Available | + | 17422 - 17796 | 14063.0 |
| dde-type integrase/transposase/recombinase | ECE24377A_RS00125 | Not Available | - | 18117 - 19013 | 34646.3 |
| is30-like element is30 family transposase | ECE24377A_RS00135 | Not Available | - | 19020 - 20171 | 44313.5 |
Pathways
12507 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism