Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli O139:H28 str. E24377A
Accession NumberNC_009801.1
Gene Summary
Adenine Count
1231957 bp
Thymine Count
1226898 bp
Guanine Count
1257721 bp
Cytosine Count
1263043 bp
Genome Length
4979619 bp
Protein-coding Genes
4497 genes
Non-Coding Genes
377 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| is256-like element is1414 family transposase | ECE24377A_RS00030 | Not Available | - | 4316 - 5524 | 45754.2 |
| is110-like element isshdy1 family transposase | ECE24377A_RS00035 | Not Available | - | 5640 - 6656 | 36937.4 |
| hypothetical protein | ECE24377A_RS30910 | Not Available | - | 6754 - 6975 | 8542.22 |
| plasmid segregation protein parm | ECE24377A_RS00045 | Not Available | + | 7123 - 8085 | 35820.6 |
| plasmid partitioning/stability family protein | ECE24377A_RS00050 | Not Available | + | 8088 - 8438 | 13222.8 |
| hnh endonuclease | ECE24377A_RS00055 | Not Available | - | 8505 - 9449 | 35743.1 |
| helix-turn-helix domain-containing protein | ECE24377A_RS00060 | Not Available | - | 9772 - 10053 | 10958.2 |
| type ii toxin-antitoxin system rele/pare family toxin | ECE24377A_RS00065 | Not Available | - | 10034 - 10363 | 12577.6 |
| dde-type integrase/transposase/recombinase | ECE24377A_RS00070 | Not Available | - | 10556 - 10975 | 16358.7 |
| heat-stable enterotoxin st-i group b | ECE24377A_RS26765 | Not Available | + | 11352 - 11570 | 7909.58 |
Pathways
12507 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism