Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli O139:H28 str. E24377A
Accession NumberNC_009801.1
Gene Summary
Adenine Count
1231957 bp
Thymine Count
1226898 bp
Guanine Count
1257721 bp
Cytosine Count
1263043 bp
Genome Length
4979619 bp
Protein-coding Genes
4497 genes
Non-Coding Genes
377 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| repa leader peptide tap | ECE24377A_RS26940 | Not Available | - | 29901 - 29975 | 2699.38 |
| replication regulatory protein repa | ECE24377A_RS00665 | Not Available | - | 30200 - 30460 | 10038.3 |
| hok/gef family protein | ECE24377A_RS26950 | Not Available | - | 30705 - 30833 | 4869.04 |
| hypothetical protein | ECE24377A_RS00670 | Not Available | - | 30904 - 31899 | 36841.1 |
| hypothetical protein | ECE24377A_RS30375 | Not Available | - | 32005 - 32289 | 10921.9 |
| type-f conjugative transfer system pilin acetylase trax | ECE24377A_RS00685 | Not Available | - | 32479 - 33210 | 26699.7 |
| duf2726 domain-containing protein | ECE24377A_RS00690 | Not Available | - | 33207 - 33773 | 21547.5 |
| hypothetical protein | ECE24377A_RS00010 | Not Available | + | 1349 - 3262 | 72127.4 |
| duf2919 family protein | ECE24377A_RS00015 | Not Available | + | 3259 - 3753 | 19114.5 |
| dde-type integrase/transposase/recombinase | ECE24377A_RS00020 | Not Available | - | 3825 - 4049 | 8955.12 |
Pathways
12507 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism