Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli O139:H28 str. E24377A
Accession NumberNC_009801.1
Gene Summary
Adenine Count
1231957 bp
Thymine Count
1226898 bp
Guanine Count
1257721 bp
Cytosine Count
1263043 bp
Genome Length
4979619 bp
Protein-coding Genes
4497 genes
Non-Coding Genes
377 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ECE24377A_RS29110 | Not Available | - | 18277 - 18519 | 9218.84 |
| duf1281 domain-containing protein | ECE24377A_RS01290 | Not Available | - | 18516 - 19418 | 34023.8 |
| Partitioning protein spyb | ECE24377A_RS01295 | Not Available | - | 20027 - 20998 | 35374.3 |
| Plasmid partition protein sopa | ECE24377A_RS01300 | Not Available | - | 20998 - 22164 | 43662.6 |
| Is629 transposase | ECE24377A_RS01310 | Not Available | - | 22697 - 23170 | 17497.5 |
| Reverse transcriptase | ECE24377A_RS01315 | Not Available | - | 23260 - 24768 | 58089.8 |
| Transposase orfa protein of insertion sequence is629 | ECE24377A_RS29840 | Not Available | - | 25441 - 26180 | 27813.1 |
| Is110 family transposase | ECE24377A_RS01330 | Not Available | + | 26212 - 26700 | 17912.8 |
| hypothetical protein | ECE24377A_RS30985 | Not Available | + | 27241 - 27321 | 3137.93 |
| Cytosine specific dna methyltransferase | ECE24377A_RS30990 | Not Available | + | 27397 - 27744 | 13374.1 |
Pathways
12507 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism