Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli O139:H28 str. E24377A
Accession NumberNC_009801.1
Gene Summary
Adenine Count
1231957 bp
Thymine Count
1226898 bp
Guanine Count
1257721 bp
Cytosine Count
1263043 bp
Genome Length
4979619 bp
Protein-coding Genes
4497 genes
Non-Coding Genes
377 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type iv conjugative transfer system coupling protein trad | ECE24377A_RS00530 | Not Available | - | 4718 - 6949 | 83896.9 |
| conjugal transfer complement resistance protein trat | ECE24377A_RS00535 | Not Available | - | 7093 - 7830 | 26109.4 |
| hypothetical protein | ECE24377A_RS00540 | Not Available | - | 7998 - 8573 | 21608.1 |
| conjugal transfer mating-pair stabilization protein trag | ECE24377A_RS00545 | Not Available | - | 8583 - 11465 | 103960.0 |
| conjugal transfer pilus assembly protein trah | ECE24377A_RS00550 | Not Available | - | 11467 - 12834 | 49530.9 |
| hok/gef family protein | ECE24377A_RS00555 | Not Available | - | 12890 - 13753 | 33204.4 |
| hypothetical protein | ECE24377A_RS00560 | Not Available | - | 13805 - 14035 | 8582.57 |
| hok/gef family protein | ECE24377A_RS30935 | Not Available | + | 14550 - 14704 | 5682.69 |
| hypothetical protein | ECE24377A_RS00570 | Not Available | - | 15035 - 15226 | 7311.77 |
| duf1380 family protein | ECE24377A_RS00575 | Not Available | - | 15223 - 15645 | 15623.5 |
Pathways
12507 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism