Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli O139:H28 str. E24377A
Accession NumberNC_009801.1
Gene Summary
Adenine Count
1231957 bp
Thymine Count
1226898 bp
Guanine Count
1257721 bp
Cytosine Count
1263043 bp
Genome Length
4979619 bp
Protein-coding Genes
4497 genes
Non-Coding Genes
377 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| thymidine phosphorylase | ECE24377A_RS26310 | Not Available | + | 4957270 - 4958592 | 47182.9 |
| phosphopentomutase | ECE24377A_RS26315 | Not Available | + | 4958644 - 4959867 | 44372.4 |
| purine-nucleoside phosphorylase | ECE24377A_RS26320 | Not Available | + | 4959947 - 4960666 | 25951.4 |
| helix-turn-helix transcriptional regulator | ECE24377A_RS31285 | Not Available | - | 4960827 - 4961090 | 9914.32 |
| lipoate--protein ligase lpla | ECE24377A_RS30305 | Not Available | - | 4961122 - 4962138 | 37837.8 |
| ytjb family periplasmic protein | ECE24377A_RS30310 | Not Available | - | 4962166 - 4962810 | 24084.2 |
| phosphoserine phosphatase | ECE24377A_RS26340 | Not Available | + | 4962916 - 4963884 | 35044.8 |
| dna repair protein rada | ECE24377A_RS26345 | Not Available | + | 4963933 - 4965315 | 49445.0 |
| multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase nadr | ECE24377A_RS26350 | Not Available | + | 4965336 - 4966568 | 47320.3 |
| energy-dependent translational throttle protein etta | ECE24377A_RS26360 | Not Available | - | 4966875 - 4968542 | 62423.4 |
Pathways
12507 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism