Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli O139:H28 str. E24377A
Accession NumberNC_009801.1
Gene Summary
Adenine Count
1231957 bp
Thymine Count
1226898 bp
Guanine Count
1257721 bp
Cytosine Count
1263043 bp
Genome Length
4979619 bp
Protein-coding Genes
4497 genes
Non-Coding Genes
377 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf3343 domain-containing protein | ECE24377A_RS26095 | Not Available | - | 4920572 - 4920829 | 9554.6 |
| putative 2-hydroxyacyl-coa dehydratase activator yjil | ECE24377A_RS26100 | Not Available | - | 4920826 - 4921593 | 27309.8 |
| double-cubane-cluster-containing anaerobic reductase | ECE24377A_RS26105 | Not Available | - | 4921603 - 4922754 | 42735.2 |
| duf445 domain-containing protein | ECE24377A_RS26110 | Not Available | - | 4922870 - 4924150 | 48184.7 |
| multidrug efflux mfs transporter mdtm | ECE24377A_RS26115 | Not Available | - | 4924191 - 4925423 | 44598.0 |
| helix-turn-helix transcriptional regulator | ECE24377A_RS29730 | Not Available | + | 4925737 - 4926433 | 23972.7 |
| brnt family toxin | ECE24377A_RS26130 | Not Available | + | 4926632 - 4926919 | 11296.4 |
| brna antitoxin family protein | ECE24377A_RS26135 | Not Available | + | 4926906 - 4927208 | 11552.6 |
| gtpase | ECE24377A_RS26140 | Not Available | - | 4927242 - 4928198 | 35694.9 |
| ybdd/yjix family protein | ECE24377A_RS26145 | Not Available | - | 4928209 - 4928412 | 7729.24 |
Pathways
12507 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism