Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli O139:H28 str. E24377A
Accession NumberNC_009801.1
Gene Summary
Adenine Count
1231957 bp
Thymine Count
1226898 bp
Guanine Count
1257721 bp
Cytosine Count
1263043 bp
Genome Length
4979619 bp
Protein-coding Genes
4497 genes
Non-Coding Genes
377 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | ECE24377A_RS31525 | Not Available | + | 4886994 - 4887128 | 4957.73 |
| snf2-related protein | ECE24377A_RS25935 | Not Available | + | 4887680 - 4890571 | 111142.0 |
| site-specific dna-methyltransferase | ECE24377A_RS25940 | Not Available | + | 4890592 - 4893714 | 119460.0 |
| dead/deah box helicase family protein | ECE24377A_RS25945 | Not Available | + | 4893717 - 4897097 | 129971.0 |
| hypothetical protein | ECE24377A_RS25950 | Not Available | - | 4897144 - 4897446 | 12007.3 |
| phosphorothioated dna-binding restriction endonuclease | ECE24377A_RS25955 | Not Available | - | 4897759 - 4898631 | 33165.6 |
| helix-turn-helix transcriptional regulator | ECE24377A_RS28905 | Not Available | + | 4898731 - 4898835 | 3960.95 |
| sialate o-acetylesterase | ECE24377A_RS25960 | Not Available | - | 4898843 - 4899823 | 36867.9 |
| n-acetylneuraminate epimerase | ECE24377A_RS25965 | Not Available | - | 4899888 - 4900994 | 39588.2 |
| n-acetylneuraminic acid outer membrane channel nanc | ECE24377A_RS25970 | Not Available | - | 4901014 - 4901730 | 27933.5 |
Pathways
12507 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism