Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli O139:H28 str. E24377A
Accession NumberNC_009801.1
Gene Summary
Adenine Count
1231957 bp
Thymine Count
1226898 bp
Guanine Count
1257721 bp
Cytosine Count
1263043 bp
Genome Length
4979619 bp
Protein-coding Genes
4497 genes
Non-Coding Genes
377 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ECE24377A_RS01215 | Not Available | - | 7779 - 8615 | 32910.1 |
| hypothetical protein | ECE24377A_RS29105 | Not Available | + | 8614 - 9912 | 48599.4 |
| conjugation system sos inhibitor psib | ECE24377A_RS01225 | Not Available | + | 9967 - 10401 | 15832.7 |
| hypothetical protein | ECE24377A_RS01230 | Not Available | + | 10398 - 11157 | 28995.2 |
| hypothetical protein | ECE24377A_RS30980 | Not Available | + | 11330 - 11479 | 5660.76 |
| duf1380 family protein | ECE24377A_RS30995 | Not Available | + | 27760 - 28182 | 15680.5 |
| hypothetical protein | ECE24377A_RS01340 | Not Available | + | 28179 - 28370 | 7319.84 |
| hypothetical protein | ECE24377A_RS01350 | Not Available | + | 29361 - 29591 | 8582.57 |
| duf3560 domain-containing protein | ECE24377A_RS01355 | Not Available | + | 29643 - 31004 | 51765.2 |
| class i sam-dependent methyltransferase | ECE24377A_RS01360 | Not Available | + | 31051 - 31614 | 21093.6 |
Pathways
12507 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism