Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli O139:H28 str. E24377A
Accession NumberNC_009801.1
Gene Summary
Adenine Count
1231957 bp
Thymine Count
1226898 bp
Guanine Count
1257721 bp
Cytosine Count
1263043 bp
Genome Length
4979619 bp
Protein-coding Genes
4497 genes
Non-Coding Genes
377 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dde-type integrase/transposase/recombinase | ECE24377A_RS00515 | Not Available | + | 74332 - 74940 | 22814.7 |
| two-partner secretion system transporter etpb | ECE24377A_RS00520 | Not Available | + | 75143 - 76954 | 64224.0 |
| Host killer protein | ECE24377A_RS01235 | Not Available | + | 11421 - 11546 | 4813.03 |
| Transposase orfa protein of insertion sequence is629 | ECE24377A_RS29830 | Not Available | + | 11971 - 12710 | 27792.1 |
| Reverse transcriptase | ECE24377A_RS01255 | Not Available | + | 13383 - 14891 | 58089.8 |
| Is629 transposase | ECE24377A_RS01260 | Not Available | + | 14981 - 15454 | 17497.5 |
| Is110 family transposase | ECE24377A_RS01265 | Not Available | - | 15493 - 15759 | 9803.99 |
| Transposase/is protein | ECE24377A_RS01270 | Not Available | - | 15818 - 16612 | 30098.7 |
| Is21 transposase | ECE24377A_RS01275 | Not Available | - | 16612 - 17784 | 45761.7 |
| Is110 family transposase | ECE24377A_RS01280 | Not Available | - | 17886 - 18179 | 10433.0 |
Pathways
12507 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism