Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli O139:H28 str. E24377A
Accession NumberNC_009801.1
Gene Summary
Adenine Count
1231957 bp
Thymine Count
1226898 bp
Guanine Count
1257721 bp
Cytosine Count
1263043 bp
Genome Length
4979619 bp
Protein-coding Genes
4497 genes
Non-Coding Genes
377 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| is1-like element is1a family transposase | ECE24377A_RS00390 | Not Available | + | 55626 - 56323 | 26441.2 |
| anr family transcriptional regulator | ECE24377A_RS31395 | Not Available | - | 56426 - 56668 | 9556.76 |
| cfa/i fimbrial subunit cfad | ECE24377A_RS00400 | Not Available | + | 56818 - 57615 | 30832.6 |
| dde-type integrase/transposase/recombinase | ECE24377A_RS26625 | Not Available | - | 57984 - 58816 | 30947.6 |
| hypothetical protein | ECE24377A_RS00415 | Not Available | - | 58816 - 59181 | 13708.1 |
| dde-type integrase/transposase/recombinase | ECE24377A_RS28995 | Not Available | + | 59228 - 60046 | 31276.1 |
| hypothetical protein | ECE24377A_RS00430 | Not Available | + | 60605 - 61735 | 42609.8 |
| tolc family protein | ECE24377A_RS00435 | Not Available | + | 61732 - 62934 | 46789.8 |
| hypothetical protein | ECE24377A_RS00440 | Not Available | + | 62897 - 63664 | 29306.3 |
| abc transporter atp-binding protein | ECE24377A_RS00445 | Not Available | + | 63657 - 64283 | 23168.5 |
Pathways
12507 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism