Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli O139:H28 str. E24377A
Accession NumberNC_009801.1
Gene Summary
Adenine Count
1231957 bp
Thymine Count
1226898 bp
Guanine Count
1257721 bp
Cytosine Count
1263043 bp
Genome Length
4979619 bp
Protein-coding Genes
4497 genes
Non-Coding Genes
377 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ECE24377A_RS00285 | Not Available | - | 39781 - 40038 | 9942.79 |
| type ii toxin-antitoxin system antitoxin ccda | ECE24377A_RS00290 | Not Available | + | 40560 - 40778 | 8440.98 |
| type ii toxin-antitoxin system toxin ccdb | ECE24377A_RS00295 | Not Available | + | 40780 - 41085 | 11693.2 |
| site-specific integrase | ECE24377A_RS00300 | Not Available | + | 41086 - 41892 | 29879.5 |
| para family protein | ECE24377A_RS00305 | Not Available | + | 42070 - 42714 | 23388.4 |
| molecular chaperone groel | ECE24377A_RS00310 | Not Available | + | 42801 - 43109 | 10938.9 |
| is66 family transposase zinc-finger binding domain-containing protein | ECE24377A_RS30925 | Not Available | + | 43331 - 43708 | 14600.4 |
| dde-type integrase/transposase/recombinase | ECE24377A_RS30670 | Not Available | + | 43744 - 44615 | 32508.9 |
| is110 family transposase | ECE24377A_RS00330 | Not Available | - | 45089 - 45922 | 31313.0 |
| dde-type integrase/transposase/recombinase | ECE24377A_RS00335 | Not Available | + | 45983 - 46159 | 6428.77 |
Pathways
12507 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism