Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes onderdonkii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes onderdonkii
Accession NumberRCXC00000000.1
Gene Summary
Adenine Count
847087 bp
Thymine Count
819146 bp
Guanine Count
1111518 bp
Cytosine Count
1145983 bp
Genome Length
3923734 bp
Protein-coding Genes
3180 genes
Non-Coding Genes
116 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | EAI99_04170 | Not Available | + | 1015233 - 1016549 | 48747.5 |
| thymidine kinase | EAI99_04175 | Not Available | + | 1016629 - 1017207 | 21750.2 |
| tetratricopeptide repeat protein | EAI99_04180 | Not Available | - | 1017386 - 1017462 | 2798.36 |
| recombinase | EAI99_04185 | Not Available | + | 1017891 - 1019240 | 52754.6 |
| transcriptional regulator | EAI99_04190 | Not Available | + | 1019381 - 1019590 | 7695.57 |
| phosphatidylinositol kinase | EAI99_04195 | Not Available | + | 1019587 - 1019907 | 11987.3 |
| type ii toxin-antitoxin system hipa family toxin | EAI99_04200 | Not Available | + | 1019910 - 1020920 | 38358.6 |
| hypothetical protein | EAI99_04205 | Not Available | + | 1020934 - 1021863 | 35515.8 |
| dna-binding protein | EAI99_04210 | Not Available | + | 1022019 - 1022330 | 11791.3 |
| virulence protein | EAI99_04215 | Not Available | + | 1022320 - 1023528 | 46315.9 |
Pathways
18 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.