Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes onderdonkii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes onderdonkii
Accession NumberRCXC00000000.1
Gene Summary
Adenine Count
847087 bp
Thymine Count
819146 bp
Guanine Count
1111518 bp
Cytosine Count
1145983 bp
Genome Length
3923734 bp
Protein-coding Genes
3180 genes
Non-Coding Genes
116 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rlua family pseudouridine synthase | EAI99_03030 | Not Available | - | 719422 - 720108 | 25462.5 |
| cytidine deaminase | EAI99_03035 | Not Available | - | 720139 - 720594 | 16607.7 |
| duf541 domain-containing protein | EAI99_03040 | Not Available | - | 720751 - 721440 | 25317.6 |
| 23s rrna (uracil(1939)-c(5))-methyltransferase rlmd | EAI99_03045 | Not Available | - | 721635 - 723044 | 52682.5 |
| hypothetical protein | EAI99_03050 | Not Available | - | 723268 - 724386 | 40851.0 |
| alpha/beta hydrolase | EAI99_03055 | Not Available | - | 724431 - 725255 | 30436.6 |
| mbl fold metallo-hydrolase | EAI99_03060 | Not Available | + | 725410 - 726078 | 24505.9 |
| fkbm family methyltransferase | EAI99_03065 | Not Available | + | 726190 - 726921 | 26992.8 |
| trna (guanosine(37)-n1)-methyltransferase trmd | EAI99_03070 | Not Available | + | 726911 - 727588 | 25535.4 |
| serine protease | EAI99_03075 | Not Available | + | 727598 - 728629 | 37705.7 |
Pathways
18 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.