Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes onderdonkii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes onderdonkii
Accession NumberRCXC00000000.1
Gene Summary
Adenine Count
847087 bp
Thymine Count
819146 bp
Guanine Count
1111518 bp
Cytosine Count
1145983 bp
Genome Length
3923734 bp
Protein-coding Genes
3180 genes
Non-Coding Genes
116 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf2813 domain-containing protein | EAI99_16375 | Not Available | + | 3818121 - 3819953 | 68834.5 |
| atp-dependent helicase | EAI99_16380 | Not Available | + | 3819946 - 3821802 | 69873.5 |
| hypothetical protein | EAI99_16385 | Not Available | - | 3822053 - 3822267 | 7510.99 |
| glycosidase | EAI99_16390 | Not Available | - | 3822267 - 3823274 | 37750.6 |
| mfs transporter | EAI99_16395 | Not Available | - | 3823280 - 3824593 | 48165.5 |
| rna polymerase sigma-70 factor | EAI99_16400 | Not Available | - | 3824743 - 3825318 | 22768.0 |
| fecr family protein | EAI99_16405 | Not Available | + | 3825499 - 3826464 | 36313.8 |
| susc/raga family tonb-linked outer membrane protein | EAI99_16410 | Not Available | + | 3826647 - 3829515 | 106280.0 |
| susc/raga family tonb-linked outer membrane protein | EAI99_16415 | Not Available | + | 3829540 - 3832458 | 107722.0 |
| ragb/susd family nutrient uptake outer membrane protein | EAI99_16420 | Not Available | + | 3832489 - 3834159 | 62334.7 |
Pathways
18 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.