Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes onderdonkii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes onderdonkii
Accession NumberRCXC00000000.1
Gene Summary
Adenine Count
847087 bp
Thymine Count
819146 bp
Guanine Count
1111518 bp
Cytosine Count
1145983 bp
Genome Length
3923734 bp
Protein-coding Genes
3180 genes
Non-Coding Genes
116 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | EAI99_14420 | Not Available | + | 3428130 - 3428861 | 27993.7 |
| mfs transporter | EAI99_14425 | Not Available | + | 3428879 - 3430033 | 40725.2 |
| glycoside hydrolase family 92 protein | EAI99_14430 | Not Available | + | 3430122 - 3432470 | 86093.6 |
| rok family protein | EAI99_14435 | Not Available | + | 3432490 - 3433392 | 31889.9 |
| hypothetical protein | EAI99_14440 | Not Available | + | 3433406 - 3435172 | 66647.5 |
| glycoside hydrolase family 92 protein | EAI99_14445 | Not Available | + | 3435299 - 3438031 | 102346.0 |
| lps-assembly protein lptd | EAI99_14450 | Not Available | - | 3438474 - 3441344 | 108578.0 |
| n-acetylmuramoyl-l-alanine amidase | EAI99_14455 | Not Available | + | 3441487 - 3442773 | 46492.6 |
| mce family protein | EAI99_14460 | Not Available | + | 3442787 - 3443788 | 36714.0 |
| endonuclease muts2 | EAI99_14465 | Not Available | + | 3443809 - 3446304 | 92022.3 |
Pathways
18 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.