Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes onderdonkii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes onderdonkii
Accession NumberRCXC00000000.1
Gene Summary
Adenine Count
847087 bp
Thymine Count
819146 bp
Guanine Count
1111518 bp
Cytosine Count
1145983 bp
Genome Length
3923734 bp
Protein-coding Genes
3180 genes
Non-Coding Genes
116 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| m23 family metallopeptidase | EAI99_13665 | Not Available | - | 3242518 - 3244245 | 63581.0 |
| recx family transcriptional regulator | EAI99_13670 | Not Available | - | 3244230 - 3244742 | 19521.5 |
| peptide chain release factor n(5)-glutamine methyltransferase | EAI99_13675 | Not Available | - | 3244724 - 3245623 | 32212.5 |
| chorismate synthase | EAI99_13680 | Not Available | - | 3245623 - 3246600 | 34291.7 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | EAI99_13685 | Not Available | - | 3246606 - 3247850 | 44818.9 |
| lps export abc transporter atp-binding protein | EAI99_13690 | Not Available | - | 3247917 - 3248738 | 30725.0 |
| dna helicase recq | EAI99_13695 | Not Available | + | 3248839 - 3251031 | 82255.9 |
| hypothetical protein | EAI99_13700 | Not Available | + | 3251108 - 3251326 | 8287.47 |
| hypothetical protein | EAI99_13705 | Not Available | + | 3251330 - 3251524 | 7256.02 |
| hypothetical protein | EAI99_13710 | Not Available | + | 3251526 - 3251765 | 9489.13 |
Pathways
18 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.