Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes onderdonkii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes onderdonkii
Accession NumberRCXC00000000.1
Gene Summary
Adenine Count
847087 bp
Thymine Count
819146 bp
Guanine Count
1111518 bp
Cytosine Count
1145983 bp
Genome Length
3923734 bp
Protein-coding Genes
3180 genes
Non-Coding Genes
116 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cpbp family intramembrane metalloprotease | EAI99_13615 | Not Available | - | 3230333 - 3230839 | 18889.9 |
| 16s rrna processing protein rimm | EAI99_13620 | Not Available | - | 3230845 - 3231375 | 19227.5 |
| 30s ribosomal protein s16 | EAI99_13625 | Not Available | - | 3231630 - 3232184 | 19554.1 |
| Trna-arg | Not Available | Not Available | + | 3232533 - 3232609 | Not Available |
| arac family transcriptional regulator | EAI99_13635 | Not Available | + | 3232735 - 3233634 | 34357.0 |
| arabinose isomerase | EAI99_13640 | Not Available | - | 3233640 - 3235049 | 50818.2 |
| hypothetical protein | EAI99_13645 | Not Available | - | 3235063 - 3238203 | 117315.0 |
| sensor histidine kinase | EAI99_13650 | Not Available | - | 3238584 - 3239897 | 49448.1 |
| sensor histidine kinase | EAI99_13655 | Not Available | - | 3239894 - 3241918 | 77190.9 |
| response regulator | EAI99_13660 | Not Available | - | 3242073 - 3242459 | 14810.2 |
Pathways
18 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.