Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes onderdonkii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes onderdonkii
Accession NumberRCXC00000000.1
Gene Summary
Adenine Count
847087 bp
Thymine Count
819146 bp
Guanine Count
1111518 bp
Cytosine Count
1145983 bp
Genome Length
3923734 bp
Protein-coding Genes
3180 genes
Non-Coding Genes
116 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| yggs family pyridoxal phosphate-dependent enzyme | EAI99_13365 | Not Available | + | 3172076 - 3172744 | 25051.1 |
| pyrroline-5-carboxylate reductase | EAI99_13370 | Not Available | + | 3172749 - 3173531 | 26852.8 |
| lysm peptidoglycan-binding domain-containing protein | EAI99_13375 | Not Available | - | 3173683 - 3174729 | 39021.2 |
| duf3109 family protein | EAI99_13380 | Not Available | - | 3174761 - 3175333 | 21318.6 |
| d-alanine--d-alanine ligase | EAI99_13385 | Not Available | - | 3175330 - 3176316 | 36079.3 |
| nicotinate (nicotinamide) nucleotide adenylyltransferase | EAI99_13390 | Not Available | - | 3176319 - 3177128 | 30996.9 |
| guanylate kinase | EAI99_13395 | Not Available | - | 3177125 - 3177694 | 21461.7 |
| yicc family protein | EAI99_13400 | Not Available | - | 3177694 - 3178566 | 32668.3 |
| 3-phosphoserine/phosphohydroxythreonine transaminase | EAI99_13405 | Not Available | + | 3178768 - 3179841 | 39874.0 |
| 3-phosphoglycerate dehydrogenase | EAI99_13410 | Not Available | + | 3179932 - 3180855 | 32932.7 |
Pathways
18 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.