Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes onderdonkii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes onderdonkii
Accession NumberRCXC00000000.1
Gene Summary
Adenine Count
847087 bp
Thymine Count
819146 bp
Guanine Count
1111518 bp
Cytosine Count
1145983 bp
Genome Length
3923734 bp
Protein-coding Genes
3180 genes
Non-Coding Genes
116 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tolc family protein | EAI99_12670 | Not Available | - | 3034187 - 3035464 | 47377.6 |
| efflux rnd transporter permease subunit | EAI99_12675 | Not Available | - | 3035464 - 3038505 | 112504.0 |
| efflux rnd transporter periplasmic adaptor subunit | EAI99_12680 | Not Available | - | 3038502 - 3039515 | 35515.6 |
| arac family transcriptional regulator | EAI99_12685 | Not Available | + | 3039581 - 3040582 | 38157.1 |
| sini family restriction endonuclease | EAI99_12690 | Not Available | - | 3040668 - 3041408 | 27548.7 |
| dna cytosine methyltransferase | EAI99_12695 | Not Available | - | 3041434 - 3042729 | 48420.5 |
| Trna-pseudo | Not Available | Not Available | + | 3043263 - 3043364 | Not Available |
| duf4595 domain-containing protein | EAI99_12705 | Not Available | - | 3044312 - 3045082 | 29297.5 |
| hypothetical protein | EAI99_12710 | Not Available | - | 3045205 - 3047175 | 72466.2 |
| hypothetical protein | EAI99_12715 | Not Available | - | 3047784 - 3048059 | 10495.7 |
Pathways
18 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.