Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes onderdonkii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes onderdonkii
Accession NumberRCXC00000000.1
Gene Summary
Adenine Count
847087 bp
Thymine Count
819146 bp
Guanine Count
1111518 bp
Cytosine Count
1145983 bp
Genome Length
3923734 bp
Protein-coding Genes
3180 genes
Non-Coding Genes
116 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent clp endopeptidase proteolytic subunit clpp | EAI99_10385 | Not Available | + | 2481334 - 2482002 | 24340.3 |
| atp-dependent clp protease atp-binding subunit clpx | EAI99_10390 | Not Available | + | 2482002 - 2483279 | 47270.5 |
| transketolase | EAI99_10395 | Not Available | + | 2483345 - 2485378 | 73545.6 |
| hypothetical protein | EAI99_10400 | Not Available | - | 2485603 - 2485998 | 15279.8 |
| methionine adenosyltransferase | EAI99_10405 | Not Available | + | 2486389 - 2487693 | 47846.8 |
| do family serine endopeptidase | EAI99_10410 | Not Available | + | 2487861 - 2489333 | 52682.0 |
| site-specific integrase | EAI99_10420 | Not Available | + | 2490553 - 2490911 | 13802.6 |
| dtdp-glucose 4,6-dehydratase | EAI99_10425 | Not Available | + | 2490912 - 2491216 | 12049.1 |
| lipopolysaccharide biosynthesis protein | EAI99_10430 | Not Available | + | 2491251 - 2492789 | 58158.8 |
| 4fe-4s dicluster domain-containing protein | EAI99_10435 | Not Available | + | 2492786 - 2493982 | 44999.0 |
Pathways
18 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.