Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes onderdonkii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes onderdonkii
Accession NumberRCXC00000000.1
Gene Summary
Adenine Count
847087 bp
Thymine Count
819146 bp
Guanine Count
1111518 bp
Cytosine Count
1145983 bp
Genome Length
3923734 bp
Protein-coding Genes
3180 genes
Non-Coding Genes
116 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| indolepyruvate oxidoreductase subunit beta | EAI99_10185 | Not Available | - | 2430376 - 2430978 | 21134.4 |
| indolepyruvate ferredoxin oxidoreductase | EAI99_10190 | Not Available | - | 2431034 - 2432635 | 57636.1 |
| marr family transcriptional regulator | EAI99_10195 | Not Available | - | 2432864 - 2433217 | 12965.8 |
| 4fe-4s ferredoxin | EAI99_10200 | Not Available | - | 2433201 - 2433404 | 7101.82 |
| thioredoxin | EAI99_10205 | Not Available | - | 2433411 - 2433869 | 16652.2 |
| sini family restriction endonuclease | EAI99_10210 | Not Available | - | 2434064 - 2434828 | 29387.0 |
| Trna-arg | Not Available | Not Available | + | 2435129 - 2435205 | Not Available |
| ahpc/tsa family protein | EAI99_10220 | Not Available | - | 2435337 - 2436386 | 37584.7 |
| crossover junction endodeoxyribonuclease ruvc | EAI99_10225 | Not Available | - | 2436405 - 2436995 | 21284.8 |
| ahpc/tsa family protein | EAI99_10230 | Not Available | - | 2437307 - 2438365 | 38326.1 |
Pathways
18 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.