Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes onderdonkii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes onderdonkii
Accession NumberRCXC00000000.1
Gene Summary
Adenine Count
847087 bp
Thymine Count
819146 bp
Guanine Count
1111518 bp
Cytosine Count
1145983 bp
Genome Length
3923734 bp
Protein-coding Genes
3180 genes
Non-Coding Genes
116 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ybak/ebsc family protein | EAI99_09880 | Not Available | - | 2359915 - 2360388 | 16947.3 |
| s-adenosylmethionine:trna ribosyltransferase-isomerase | EAI99_09885 | Not Available | - | 2360448 - 2361659 | 45542.6 |
| beta-n-acetylhexosaminidase | EAI99_09890 | Not Available | - | 2361878 - 2364166 | 84751.0 |
| l-aspartate oxidase | EAI99_09895 | Not Available | + | 2364391 - 2365947 | 57728.2 |
| peptide chain release factor 3 | EAI99_09900 | Not Available | + | 2366111 - 2367694 | 59266.8 |
| arabinan endo-1,5-alpha-l-arabinosidase | EAI99_09905 | Not Available | - | 2367897 - 2368922 | 37658.3 |
| pirin family protein | EAI99_09910 | Not Available | - | 2369102 - 2369815 | 26402.1 |
| duf5009 domain-containing protein | EAI99_09915 | Not Available | - | 2369906 - 2371006 | 39670.3 |
| kama family protein | EAI99_09920 | Not Available | - | 2371167 - 2373263 | 80752.1 |
| site-specific integrase | EAI99_09925 | Not Available | + | 2373930 - 2375204 | 49512.5 |
Pathways
18 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.