Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes onderdonkii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes onderdonkii
Accession NumberRCXC00000000.1
Gene Summary
Adenine Count
847087 bp
Thymine Count
819146 bp
Guanine Count
1111518 bp
Cytosine Count
1145983 bp
Genome Length
3923734 bp
Protein-coding Genes
3180 genes
Non-Coding Genes
116 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | EAI99_09830 | Not Available | + | 2344562 - 2346562 | 75642.8 |
| duf4361 domain-containing protein | EAI99_09835 | Not Available | + | 2346585 - 2347574 | 37162.7 |
| duf5005 domain-containing protein | EAI99_09840 | Not Available | + | 2347593 - 2348975 | 51962.2 |
| beta-mannosidase | EAI99_09845 | Not Available | + | 2349049 - 2351934 | 109439.0 |
| alpha-rhamnosidase | EAI99_09850 | Not Available | + | 2351961 - 2354678 | 100931.0 |
| hypothetical protein | EAI99_09855 | Not Available | + | 2354871 - 2355365 | 18132.6 |
| duf4961 domain-containing protein | EAI99_09860 | Not Available | + | 2355378 - 2356364 | 36439.0 |
| phosphopyruvate hydratase | EAI99_09865 | Not Available | - | 2356569 - 2357870 | 46464.3 |
| sodium:proton antiporter | EAI99_09870 | Not Available | + | 2358067 - 2359251 | 43292.6 |
| duf4375 domain-containing protein | EAI99_09875 | Not Available | + | 2359305 - 2359805 | 19041.2 |
Pathways
18 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.