Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes onderdonkii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes onderdonkii
Accession NumberRCXC00000000.1
Gene Summary
Adenine Count
847087 bp
Thymine Count
819146 bp
Guanine Count
1111518 bp
Cytosine Count
1145983 bp
Genome Length
3923734 bp
Protein-coding Genes
3180 genes
Non-Coding Genes
116 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa thioesterase | EAI99_05755 | Not Available | - | 1363976 - 1364389 | 16517.0 |
| fad synthetase | EAI99_05760 | Not Available | - | 1364395 - 1365132 | 26555.0 |
| redox-sensing transcriptional repressor rex | EAI99_05765 | Not Available | - | 1365234 - 1365890 | 23895.0 |
| lysm peptidoglycan-binding domain-containing protein | EAI99_05770 | Not Available | - | 1365901 - 1367745 | 68551.1 |
| 3'-5' exonuclease | EAI99_05775 | Not Available | - | 1367742 - 1368509 | 29309.1 |
| dna polymerase iii subunit beta | EAI99_05780 | Not Available | - | 1368520 - 1369644 | 40693.1 |
| phosphorylase | EAI99_05785 | Not Available | - | 1369685 - 1370563 | 32421.0 |
| phosphoglucosamine mutase | EAI99_05790 | Not Available | + | 1370689 - 1372080 | 50110.2 |
| copper resistance protein nlpe | EAI99_05795 | Not Available | + | 1372101 - 1372538 | 16055.3 |
| dipeptidase | EAI99_05800 | Not Available | + | 1372551 - 1373918 | 50174.3 |
Pathways
18 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.